Interest in validating the eddy covariance (EC) technique under wave-induced flows led to a series of experiments in a 104-m-long large wave flume (LWF) using an acoustic Doppler velocimeter (ADV) and two oxygen microelectrodes (tips ~2 mm apart) mounted on a sturdy tripod. Four additional ADVs positioned within the flume provided comparative near-bed velocity measurements during experiments with irregular waves over a sand bed. These measurements revealed that modifications of local turbulence by the tripod frame were insignificant. However, errors in velocity measurements were at times observed for setups where the microelectrode tips protruded into the ADV's measurement volume. Disparate oxygen microelectrode velocity effects (stirring sensitivities) combined with response time offsets were also identified as problems, adding biases to EC flux derivations. Microelectrode velocity effects were further investigated through modeling designed to mimic the LWF data, and through examination of a 12-h dataset from the Oregon shelf. The modeling showed that under progressive waves, an artificial EC flux, or bias, arises most severely when the velocity sensitivity of the microelectrode is unequal in opposing flow directions or augmented by horizontal currents, and the velocity and oxygen data are not perfectly aligned in time. Sensitivities to wave motions were seen in the oxygen measurements from the Oregon shelf, contributing to an average flux of +2.7 ± 0.6 mmol m-2 day-1 (SE, n = 22) at wave frequencies. Since overall EC fluxes equaled only -4.1 ± 1.8 mmol m-2 day-1 (SE, n = 22), sources of EC biasing coupled to waves cannot be ruled out as potential problems for estimating exact benthic oxygen fluxes under common continental shelf field conditions.

Cold-water coral reefs and adjacent sponge grounds are distributed widely in the deep ocean, where only a small fraction of the surface productivity reaches the seafloor as detritus. It remains elusive how these hotspots of biodiversity can thrive in such a food-limited environment, as data on energy flow and organic carbon utilization are critically lacking. Here we report in situ community respiration rates for cold-water coral and sponge ecosystems obtained by the non-invasive aquatic Eddy Correlation technique. Oxygen uptake rates over coral reefs and adjacent sponge grounds in the Træna Coral Field (Norway) were 9-20 times higher than those of the surrounding soft sediments. These high respiration rates indicate strong organic matter consumption, and hence suggest a local focusing onto these ecosystems of the downward flux of organic matter that is exported from the surface ocean. Overall, our results show that coral reefs and adjacent sponge grounds are hotspots of carbon processing in the food-limited deep ocean, and that these deep-sea ecosystems play a more prominent role in marine biogeochemical cycles than previously recognized.

We present and compare small sediment-water fluxes of O2 determined with the eddy correlation technique, with in situ chambers, and from vertical sediment microprofiles at a 1450 m deep-ocean site in Sagami Bay, Japan. The average O2 uptake for the three approaches, respectively, was 1.62 ± 0.23 (SE, n = 7), 1.65 ± 0.33 (n = 2), and 1.43 ± 0.15 (n = 25) mmol m-2 d-1. The very good agreement between the eddy correlation flux and the chamber flux serves as a new, important validation of the eddy correlation technique. It demonstrates that the eddy correlation instrumentation available today is precise and can resolve accurately even very small benthic O2 fluxes. The correlated fluctuations in vertical velocity and O2 concentration that give the eddy flux had average values of 0.074 cm s-1 and 0.049 μM. The latter represents only 0.08% of the 59 μM mean O2 concentration of the bottom water. Note that these specific fluctuations are average values, and that even smaller variations were recorded and contributed to the eddy flux. Our findings demonstrate that the eddy correlation technique is a highly attractive alternative to traditional flux methods for measuring even very small benthic O2 fluxes. © 2009, by the American Society of Limnology and Oceanography, Inc.

To the best of our knowledge, the understanding of benthic metabolism of coastal sedimentary areas is still limited due to the complexity of determining their true in situ dynamics over large spatial and temporal scales. Multidisciplinary methodological approaches are then necessary to increase our comprehension of factors controlling benthic processes and fluxes. An aquatic Eddy Covariance (EC) system and Benthic Chambers (BC) were simultaneously deployed during the winter of 2013 in the Bay of Brest within a Maerl bed and a bare mudflat to quantify and compare O2 exchange at the sediment–water interface. Environmental abiotic parameters (i.e., light, temperature, salinity, current velocity and water depth) were additionally monitored to better understand the mechanisms driving benthic O2 exchange. At both sites, EC measurements showed short-term variations (i.e. 15 min) in benthic O2 fluxes according to environmental conditions. At the Maerl station, EC fluxes ranged from -21.0 mmol m−2 d−1 to 71.3 mmol m−2 d−1 and averaged 22.0 ± 32.7 mmol m−2 d−1 (mean ± SD), whilst at the bare muddy station, EC fluxes ranged from -43.1 mmol m−2 d−1 to 12.1 mmol m−2 d−1 and averaged -15.9 ± 14.0 mmol m−2 d−1 (mean ± SD) during the total deployment. Eddy Covariance and Benthic Chambers measurements showed similar patterns of temporal O2 flux changes at both sites. However, at the Maerl station, BC may have underestimated community respiration. This may be due to the relative large size of the EC footprint (compared to BC), which takes into account the mesoscale spatial heterogeneity (e.g. may have included contributions from bare sediment patches). Also, we hypothesize that the influence of bioturbation induced by large-sized mobile benthic fauna on sediment oxygen consumption was not fully captured by BC compared to EC. Overall, the results of the present study highlight the importance of taking into account specific methodology limitations with respect to sediment spatial macro-heterogeneity and short-term variations of environmental parameters to accurately assess benthic O2 exchange in the various benthic ecosystems of the coastal zone.